Tutorial: Running Chipster in the EGI FedCloud
- Kimmo Mattila (CSC)
- Diego Scardaci (EGI.eu/INFN)
Kimmo Mattila (CSC)
Chipster is a bioinformatics environment that includes over 350 analysis tools for high-throughput sequencing and microarray data. The tools are complemented with a comprehensive collection of reference datasets, such as genome indexes for the Tophat and BWA aligners. The tools can be used on command line or via an intuitive GUI, which offers also interactive visualizations and workflow...